* Corresponding Author
Detection and Control Bacteria Cause Grain Rot Burkholderia glumae on Rice
https://doi.org/10.22146/jpti.37755 Syahri Syahri(1*), Renny Utami Somantri(2), Priatna Sasmita(3)
(1) South Sumatera Assessment Institute for Agricultural Technology (South Sum. AIAT) Jln. Kol. H. Barlian No. 83 Km. 6 Palembang, South Sumatera 30153
(2) South Sumatera Assessment Institute for Agricultural Technology (South Sum. AIAT) Jln. Kol. H. Barlian No. 83 Km. 6 Palembang, South Sumatera 30153
(3) Indonesian Center for Rice Research (ICRR) Jln. Raya 9, Sukamandi, Subang, West Java 41256
(*) Corresponding Author
Abstract
Burkholderia glumae, before mid-2018, is categorized as plant quarantine pest A2 Group 1 that its existence has been detected in Indonesia. B. glumae has been known to spread in the central production of rice in Java, Sumatra, Borneo dan Sulawesi. This review aimed to explain the strategies for B. glumae detection through its characteristics and to prevent the divergence of this bacterium in Indonesia. The previous studies reported that the bacteria could reduce yield up to 75% and caused the decrease of weight-grain or the increase of empty grain. The disease intensity is affected by environmental and physiological factors such as warm temperature at nighttime and high rainfall intensity. The optimum temperature for the development of the disease is 30–35°C. Moreover, the pathogen could survive at a temperature of 41°C. The tropical area of 32-36°C are suitable for B. glumae. Recently, the effective control of the disease in the field has not been found yet. Meanwhile, early detection of the disease is not yet determined, even though it is necessary to prevent its spread in rice cultivation in Indonesia. Detection of the disease by Agricultural Quarantine Agency as a frontline is needed to check the entry of the disease carried by the import activities of the seed. Detection in the suspected field by protection institutes through frequent surveillance in central production areas of rice should be considered as an important task.. The effective techniques to prevent B. glumae are the use of resistant varieties, the practice of seed treatments (using antibacterial, bactericide, heat treatment or plant extract), and the application of oxolinic acid to the crops.
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Alvarez, A.M. 2004. Integrated Approaches for Detection of Plant Pathogenic
Bacteria and Diagnosis of Bacterial Disease. Annual Review of Phytopathology 42: 339–366.
Andrews, J.H, & R.F. Harris. 2000. The Ecology and Biogeography of Microorganisms on Plant Surfaces. Annual Review of Phytopathology 38: 145–180.
Badan Karantina Pertanian [Barantan]. 2015. Laporan Tahunan Badan Karantina Pertanian 2014. Badan Karantina Pertanian, Jakarta. 395 p.
Ballard, R.W., N.J. Palleroni, M. Doudoroff, & R.Y. Stanier. 1970. Taxonomy of the aerobic pseudomonads: Pseudomonas cepacia, P. marginata, P. alliicola and P. caryophylli. Journal of General Microbiology 60:199–214.
Belmar, S.B., C.D. Kelsey, T.A. Gebremariam, & Y.A. Wamishe. 2014. Seed Management to Control Bacterial Panicle Blight of Rice, p. 82-94. In R.J. Norman & K.A.K. Moldenhauer (eds), Arkansas Rice Research Studies 2014. Division of Agriculture. University of Arkansas Systems.
CABI. 2017. Burkholderia glumae (Bacterial Grain Rot). http://www.cabi.org/isc/datasheet/44964, modified 19/01/2017.
Fang, Y., L. Xu, W. Tian, Y. Huai, S. Yu, M. Lou, & G. Xie, . 2009. Real-time Fluorescence PCR Method for Detection of Burkholderia glumae from Rice. Rice Science 16: 157-160.
Furuya, N.,H. Ura, K. Iiyama, M. Matsumoto, M. Takeshita & Y. Takanami. 2002. Specific Oligonucleotide Primers Based on Sequences of the 16S-23S rDNA Spacer Region for the Detection of Burkholderia gladioli by PCR. Journal of General Plant Phytopathology 68: 220-224.
Goto, K., & Ohata, K. 1956. New Bacterial Diseases of Rice (Brown Stripe and Grain Rot). Annual Phytophatology Society of Japan 21: 46-47.
Ham, J.H., M.C. Rush, & R.A. Melanson. 2011. Burkholderia glumae: Next Major Pathogen of Rice? Molecular Plant Pathology 12: 329–339.
Handiyanti, M., S. Subandiyah, & T. Joko. 2018. Deteksi Molekuler Burkholderia glumae, Penyebab Penyakit Hawar Malai Padi. Jurnal Perlindungan Tanaman Indonesia 22: 98-107.
Hikichi, Y., K. Tsujiguchi, Y. Maeda, & T. Okuno. 2001. Development of Increased Oxolinic Acid-Resistance in Burkholderia glumae. Journal of General Plant Pathology 67: 58-62.
Iiyama, K., N. Furuya, Y. Takanami, & N. Matsuyama. 1995. A Role of Phytotoxin in Virulence of Pseudomonas glumae Kurita et Tabei. Japanese Journal of Phytophatology 61:470–476.
Iwai, T., H. Kaku, R. Honkura, S. Nakamura, H. Ochiai, T. Sasaki, & Y. Ohashi. 2002. Enhanced Resistance to Seed-Transmitted Bacterial Diseases in Transgenic Rice Plants Overproducing an Oat Cell-Wall-Bound Thionin. Molecular Plant-Microbe Interactions 15: 515–521.
Jeong, Y., J. Kim, S. Kim, Y. Kang, T. Nagamatsu, & I. Hwang. 2003. Toxoflavin Produced by Burkholderia glumae Causing Ricegrain Rot is Responsible for Inducing Bacterial Wilt in Many Field Crops. Plant Disease 87: 890–895.
Kawanishi, T., T. Shiraishi, Y. Okano, K. Sugawara, M. Hashimoto, K. Maejima, K. Komatsu, S. Kakizawa, Y. Yamaji, H. Hamamoto, K. Oshima, & S. Namba. 2011. New Detection Systems of Bacteria Using Highly Selective Media Designed by SMART: Selective Medium Design Algorithm Restricted by Two Constraints. PLoS ONE 6: 1-10.
Kawaradani, M., K. Okada, & S. Kusakari. 2000. New Selective Medium for Isolation of Burkholderia glumae from Rice Seeds. Journal of General Plant Pathology 66: 234-237.
Kim, J., Y. Kang, JG Kim, O. Choi, & I. Hwang. 2010. Occurrence of Burkholderia glumae on Rice and Field Crops in Korea. Journal Plant Pathology 26(3): 271-272.
Kim, B.K., M.S. Cho, M.H. Kim, H.J. Choi, M.J. Kang, H.S. Shim, T.Y. Ahn, J. Kim, & D.S. Park. 2012. Rapid and Specific Detection of Burkholderia glumae in Rice Seed by Real-Time Bio-PCR Using Species-Specific Primers Based on an rhs Family Gene. Plant Disease 96: 577-580.
Krausz, J.P. 2005. Management of Bacterial Panicle Blight Caused by Burkholderia glumae. TRRF Report on 2005 Research. Department of Plant Pathology, Texas A&M University. Texas. 4p.
Kurita, T., H. Tabei, & T. Sato. 1964. A Few Studies on Factors Associated with Infection of Bacterial Grain Rot of Rice. Annual Phytopathology Society of Japan 29: 60.
Mew, T. W. 1992. Grain Rot. p. 9. In Webster, R.K. & P.S. Gunnell. (eds.) Compendium of Rice Diseases. APS Press, St. Paul, MN.
Zeigler, G.S., & E. Alvarez. 1990. Characteristics of Pseudomonas spp. Causing Grain Discoloration and Sheath Rot of Rice, and Associated Pseudomonas Epiphytes. Plant Disease 74: 917-922.
Mizobuchi, R., H. Sato, S. Fukuoka, T. Tanabata, S. Tsushima, T. Imbe, & M. Yano. 2013. Mapping a Quantitative Trait Locus for Resistance to Bacterial Grain Rot in Rice. Rice 2013 6: 13.
Nandakumar, R., A.K.M. Shahjahan, X.L. Yuan, E. Dickstein, D.E. Groth, C.A. Clark, R.D. Cartwright, & M.C. Rush. 2009. Burkholderia glumae and B. gladioli Cause Bacterial Panicle Blight in Rice in the Southern United States. Plant Disease 93: 896–905
Nghiep, H.V., P.V. Du, & S.B. Mathur. 2001. Effect of Cleaning on Seed Health and Seed Germination of Rice. Omonrice 9: 138-139.
Niño, B.C.J.S. 2014. Identificación Molecular de Burkholderia glumae, Causante del Añublo Bacterial, en Cinco Zonas Arroceras de Nicaragua. Universidad Nacional Agraria Facultad de Agronomía. Nicaragua. 23 p.
Peraturan Menteri Pertanian (Permentan) No. 51 Tahun 2015. Perubahan Atas Peraturan Menteri Pertanian Nomor 93/Permentan/OT.140/12/2011 Tentang Jenis Organisme Pengganggu Tumbuhan Karantina.
Peraturan Menteri Pertanian (Permentan) Nomor 31/PERMENTAN/KR.010/7/2018. Perubahan Kedua Atas Peraturan Menteri Pertanian Nomor 93/Permentan/OT.140/12/2011 Tentang Jenis Organisme Pengganggu Tumbuhan Karantina.
Pinson, S.R.M., A.K.M. Shahjahan, M.C. Rush, & D.E. Groth. 2010. Bacterial Panicle Blight Resistance QTLs in Rice and Their Association with Other Disease Resistance Loci and Heading Date. Crop Science 50:1287–1297.
Rush, M.C. 2007. A Field Test of Two Non-pathogenic, Genetically Engineered Mutant Strains of Burkholderia glumae. U.S. Department of Agriculture Animal and Plant Health Inspection Service Biotechnology Regulatory Services. 26 p.
Saddler, G.S. 1994. IMI Descriptions of Fungi and Bacteria, Set 122, Nos 1211-1220. Mycopathologia 128: 59–60.
Sayler, R.J, R.D. Cartwright, & Y. Yang. 2006. Genetic Characterization and Real-Time PCR Detection of Burkholderia glumae, a Newly Emerging Bacterial Pathogen of Rice in the United States. Plant Disease 90: 603-610.
Shahjahan, A.K.M., M.C. Rush, D.E. Groth, C.A. Clark. 2000a. Panicle Blight. Rice Journal 15: 26–29.
Suzuki, F., H. Sawada, K. Azegami, & K. Tsuchiya. 2004. Molecular Characterization of The Tox Operon Involved in Toxoflavin Biosynthesis of Burkholderia glumae. Journal of General Plant Pathology 70: 97–107.
Torsvik, V., & L. Øvrea˚s. 2002. Microbial Diversity and Function in Soil: From Genes to Ecosystems. Current Opinion on Microbiology 5: 240–245.
Trung, H.M., N.V. Van, N. V. Vien, D. T. Lam, & M. Lien. 1993. Occurrence of Rice Grain Rot Disease in Vietnam. International Rice Research Notes 18: 30.
Tsushima, S., S. Mogi, & H. Saito. 1986. Effect of Temperature on the Growth of Pseudomonas glumae and the Development of Rice Bacterial Grain Rot. Association Plant Protection Kyushu 32: 14–16.
Tsushima, S., H. Naito, & M. Koitabashi. 1995. Change in Panicle Susceptibility Associated with Flowering Rate of Spikelets in Bacterial Grain Rot of Rice Caused by Pseudomonas glumae. Annual Phytopathology Society of Japan 61: 109–113.
Tsushima, S. 1996. Epidemiology of Bacterial Grain Rot of Rice Caused by Pseudomonas glumae. JARQ 30: 85–89.
Tsushima, S. 2011. Study on Control and Epidemiology of Bacterial Grain Rot of Rice. Journal of General Plant Pathology 77: 358–360.
Tsushima, S., S. Wakimoto & S. Mogi. 1986. Selective Medium for Detecting Pseudomonas glumae Jurita et Tabei, the Causal Bacterium of Grain Rot of Rice. Annual Phytopathology Society of Japan 52: 253-259.
Uematsu, T., D. Yoshimura, K. Nishiyama, T. Ibaraki, & H. Fujii. 1976. Occurrence of Bacterial Seedling Rot in Nursery Flat, Caused by Grain Rot Bacterium Pseudomonas glumae. Annual Phytopathology Society of Japan 42: 310-312.
Yuan, X. 2004. Identification of Bacterial Pathogens Causing Panicle Blight of Rice in Louisiana. Thesis. The Department of Plant Pathology and Crop Physiology, Graduate Faculty of the Louisiana State University and Agricultural and Mechanical College, Louisiana. 97 p.
Zhou, X.G, A.M. McClung, M.O. Way, Y. Jo, R.E. Tabien, & L.T. Wilson. 2011. Severe Outbreak of Bacterial Panicle Blight Across Texas Rice Belt in 2010. Phytopathology 10: S205
Zhou-qi, C., Zhu Bo, Xie Guan-lin, Li Bin, & Huang Shi-wen. 2016. Research Status and Prospect of Burkholderia glumae, the Pathogen Causing Bacterial Panicle Blight. Rice Science 23: 111-118.
DOI: https://doi.org/10.22146/jpti.37755
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