Evaluation of N-benzoylthiourea derivatives as possible analgesic agents by predicting their physicochemical and pharmacokinetic properties, toxicity, and analgesic activity
Suko Hardjono(1*), Siswandono Siswandono(2), Rina Andayani(3)
(1) Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Airlangga University, Campus B Jalan Dharmawangsa Dalam, Surabaya 60282, Indonesia
(2) Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Airlangga University, Campus B Jalan Dharmawangsa Dalam, Surabaya 60282, Indonesia
(3) Department of Pharmacy, Faculty of Medicine, Hang Tuah University, Jalan Gadung No. 1, Komplek Barat RSAL dr. Ramelan, Surabaya 60111, Indonesia
(*) Corresponding Author
Abstract
This study aimed to predict the physicochemical properties, pharmacokinetic properties (ADME), toxicity, and analgesic activity of 30 compounds of N-benzoylthiourea derivatives that are potential analgesic drugs. One of the mechanisms of action of N-benzoylthiourea derivatives is the inhibition of the cyclooxygenase-2 (COX-2) isoenzyme. An in silico test was performed by docking a compound that would predict its activity with the target COX-2 isoenzyme, PDB ID: 1PXX, using the MVD (Molegro Virtual Docker) program. The result of the docking was a form of energy bond indicated by the value of the rerank score (RS), where compounds that had lower RS values were predicted to have a higher activity. The pkCSM and Protox online tools were used to predict various physicochemical properties. Based on the RS values, the N-benzoylthiourea derivatives can be predicted to have lower analgesic activity than diclofenac, the reference ligand. Three of the N-benzoylthiourea derivatives—N-(2,4-bis-trifluoromethyl)-benzoylthiourea, N-(3,5-bis-trifluoromethyl)benzoylthiourea, and N-(3-trifluoromethoxy)-benzoylthiourea—had RS values of -90.82, -94.73, and -92.76, respectively, suggesting that these compounds were predicted to have analgesic activity relatively similar to diclofenac (RS value = -95.16). Furthermore, the majority of the N-benzoylthiourea derivatives were predicted to have good pharmacokinetic properties (ADME), and cause relatively low toxicity.
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Brunton L, Chabner BA, Knollman B. 2011. Goodman and Gilman’s The Pharmacological Basis of Therapeutics, 12th edition. New York: McGraw Hill Professional.
Budiati T, Suzana, Surdijati S. 2010. Sintesis, uji aktivitas analgesik dan anti- inflamasi senyawa benzoiltiourea tersubstitusi [Synthesis, analgesic and anti-inflammatory activities of substituted benzoylthioureas]. Majalah Farmasi Indonesia 21:68--76.
Chander S, Tang C-R, Al-Maqtari HM, Jamalis J, Penta A, Hadda TB, Sirat HM, Zheng Y-T, Sankaranarayanan M. 2017. Synthesis and study of anti-HIV-1 RT activity of 5-benzoyl-4-methyl-1,3,4,5-tetrahydro-2H-1,5-benzodiazepin-2-one derivatives. Bioorganic Chemistry 72:74--79. doi:10.1016/j.bioorg.2017.03.013.
Hardjono S. 2012. Modifikasi Struktur 1-(benzoiloksi)urea dan Hubungan Kuantitatif Struktur-Aktivitas Sitotoksiknya [Dissertation]. [Surabaya]: Airlangga University.
Hardjono S, Siswodihardjo S, Pramono P, Darmanto W. 2016. Quantitative structure-cytotoxic activity relationship 1-(benzoyloxy)urea and its derivative. Current Drug Discovery Technologies 13:101--108.
Hinchliffe A. 2008. Molecular Modelling for Beginners. 2nd edition. Chichester: John Wiley & Sons Ltd.
Jensen F. 2007. Introduction to Computational Chemistry. 2nd edition. Chichester: John Wiley & Sons Ltd.
Lee Jeewoo, Kang S-U, Choi H-K, Lee Jiyoun, Lim J-O, Kil M-J, Jin M-K, Kim K-P, Sung J-H, Chung S-J, et al. 2004. Analysis of structure-activity relationships for the “B-region” of N-(3-acyloxy-2-benzylpropyl)-N(’)-[4-(methylsulfonylamino)benzyl]thiourea analogues as vanilloid receptor antagonists: discovery of an N-hydroxythiourea analogue with potent analgesic activity. Bioorganic & Medicinal Chemistry Letters 14:2291--2297. doi:10.1016/j.bmcl.2004.02.002.
Lee Jeewoo, Lee Jiyoun, Kang M-S, Kim K-P, Chung S-J, Blumberg PM, Yi J-B, Park YH. 2002. Phenolic modification as an approach to improve the pharmacology of the 3-acyloxy-2-benzylpropyl homovanillic amides and thioureas, a promising class of vanilloid receptor agonists and analgesics. Bioorganic & Medicinal Chemistry 10:1171--1179.
Lipinski CA, Lombardo F, Dominy BW, Feeney PJ. 2001. Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings. Advanced Drug Delivery Reviews 46:3–26.
Park H, Park M, Choi J, Choi S, Lee Jihye, Park B, Kim MG, Suh Y, Cho H, Oh U, et al. 2003. Synthesis of N,N’,N"-trisubstituted thiourea derivatives and their antagonist effect on the vanilloid receptor. Bioorganic & Medicinal Chemistry Letters 13:601–604.
Pires DEV, Blundell TL, Ascher DB. 2015. pkCSM: predicting small-molecule pharmacokinetic and toxicity properties using graph-based signatures. Journal of Medicinal Chemistry 58:4066–4072. doi:10.1021/acs.jmedchem.5b00104.
Rowlinson SW, Kiefer JR, Prusakiewicz JJ, Pawlitz JL, Kozak KR, Kalgutkar AS, Stallings WC, Kurumbail RG, Marnett LJ. 2003. A novel mechanism of cyclooxygenase-2 inhibition involving interactions with Ser-530 and Tyr-385. Journal of Biological Chemistry 278:45763–45769. doi:10.1074/jbc.M305481200.
Ruswanto, Siswandono, Richa M, Tita N, Tresna L. 2017. Molecular docking of 1-benzoyl-3-methylthiourea as anti cancer candidate and its absorption, distribution, and toxicity prediction. Journal of Pharmaceutical Science and Research 9:680--684.
Saeed A, Rehman S, Channar PA, Larik FA, Abbas Q, Hassan M, Raza H, Flörke U, Seo S-Y. 2017. Long chain 1-acyl-3-arylthioureas as jack bean urease inhibitors, synthesis, kinetic mechanism and molecular docking studies. Journal of the Taiwan Institute of Chemical Engineers 77:54–63. doi:10.1016/j.jtice.2017.04.044.
Schlick T. 2010. Molecular modeling and simulation: an interdisciplinary guide. 2nd edition. New York: Springer.
Shalas AF, Siswandono, Rudyanto M. 2016. Synthesis and structure-activity relationship of 1-allyl-3-(2-chlorobenzoyl) thiourea as analgesic. International Journal of Pharmacy and Pharmaceutical Sciences 8:297--298.
Siswandono. 2014. Pengembangan Obat Baru [Development of New Drugs]. 1st edition. Surabaya: Airlangga University Press.
Siswandono, editor. 2016. Kimia Medisinal I [Medicinal Chemistry I]. 2nd edition. Surabaya: Airlangga University Press.
Thomsen R, Christensen MH. 2006. MolDock: a new technique for high-accuracy molecular docking. Journal of Medicinal Chemistry 49:3315–3321. doi:10.1021/jm051197e.
United Nations. 2005. A guide tothe globally harmonized system of classification and labeling of chemicals {(GHS)}.
DOI: https://doi.org/10.22146/ijbiotech.27171
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